Research workbench
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (Q8DKT0)
Analyse AlphaFold monomer V2.0 prediction for proline--tRNA ligase (Q8DKT0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8DKT0
- Type
- protein
- Length
- 602 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Proline--tRNA ligase
- UniProt
- Q8DKT0
- Pockets
- 4 · best druggability 0.71
Structure
1 distinct chain · 30% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 602 | 30% helix, 30% strand | Q8DKT0 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 554 | 0.71 | 0.80 | 54 | empty |
| 2 | 124 | 0.48 | 0.79 | 24 | empty |
| 3 | 126 | 0.37 | 0.73 | 28 | empty |
| 4 | 95 | 0.34 | 0.73 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DKT0
- Elsewhere: UniProt Q8DKT0 · AlphaFold DB Q8DKT0
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