Research workbench
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (Q8SSD7)
Analyse AlphaFold monomer V2.0 prediction for proline--tRNA ligase (Q8SSD7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8SSD7
- Type
- protein
- Length
- 501 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xeF0D3D8E99004dA2f643cd0ce1367dE3512fAd6B
- Molecule
- Proline--tRNA ligase
- UniProt
- Q8SSD7
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 34% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 501 | 34% helix, 29% strand | Q8SSD7 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 612 | 0.74 | 0.81 | 55 | empty |
| 2 | 69 | 0.42 | 0.80 | 15 | empty |
| 3 | 81 | 0.38 | 0.77 | 17 | empty |
| 4 | 75 | 0.30 | 0.73 | 20 | empty |
| 5 | 56 | 0.30 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8SSD7
- Elsewhere: UniProt Q8SSD7 · AlphaFold DB Q8SSD7
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