Research workbench
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (B2KCB2)
Analyse AlphaFold monomer V2.0 prediction for proline--tRNA ligase (B2KCB2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B2KCB2
- Type
- protein
- Length
- 573 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
- Molecule
- Proline--tRNA ligase
- UniProt
- B2KCB2
- Pockets
- 5 · best druggability 0.71
Structure
1 distinct chain · 32% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 573 | 32% helix, 30% strand | B2KCB2 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 572 | 0.71 | 0.80 | 51 | empty |
| 2 | 143 | 0.51 | 0.79 | 26 | empty |
| 3 | 183 | 0.43 | 0.73 | 30 | empty |
| 4 | 53 | 0.34 | 0.78 | 21 | empty |
| 5 | 50 | 0.33 | 0.78 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2KCB2
- Elsewhere: UniProt B2KCB2 · AlphaFold DB B2KCB2
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