Research workbench
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (Q890M2)
Analyse AlphaFold monomer V2.0 prediction for proline--tRNA ligase (Q890M2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q890M2
- Type
- protein
- Length
- 570 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Proline--tRNA ligase
- UniProt
- Q890M2
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 31% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 570 | 31% helix, 30% strand | Q890M2 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 534 | 0.72 | 0.81 | 54 | empty |
| 2 | 114 | 0.52 | 0.82 | 22 | empty |
| 3 | 100 | 0.42 | 0.77 | 19 | empty |
| 4 | 78 | 0.32 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q890M2
- Elsewhere: UniProt Q890M2 · AlphaFold DB Q890M2
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