Research workbench
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (Q1LSM8)
Analyse AlphaFold monomer V2.0 prediction for proline--tRNA ligase (Q1LSM8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1LSM8
- Type
- protein
- Length
- 557 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Proline--tRNA ligase
- UniProt
- Q1LSM8
- Pockets
- 5 · best druggability 0.66
Structure
1 distinct chain · 29% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 557 | 29% helix, 28% strand | Q1LSM8 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 430 | 0.66 | 0.79 | 47 | empty |
| 2 | 130 | 0.41 | 0.75 | 22 | empty |
| 3 | 66 | 0.40 | 0.80 | 15 | empty |
| 4 | 113 | 0.35 | 0.73 | 19 | empty |
| 5 | 55 | 0.29 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1LSM8
- Elsewhere: UniProt Q1LSM8 · AlphaFold DB Q1LSM8
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