Research workbench
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (B8J9M0)
Analyse AlphaFold monomer V2.0 prediction for proline--tRNA ligase (B8J9M0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8J9M0
- Type
- protein
- Length
- 574 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xCe0557e6327eE0B3604236E5B714ad253D138cab
- Molecule
- Proline--tRNA ligase
- UniProt
- B8J9M0
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 30% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 574 | 30% helix, 29% strand | B8J9M0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 571 | 0.72 | 0.80 | 49 | empty |
| 2 | 130 | 0.51 | 0.80 | 23 | empty |
| 3 | 121 | 0.36 | 0.73 | 28 | empty |
| 4 | 62 | 0.30 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8J9M0
- Elsewhere: UniProt B8J9M0 · AlphaFold DB B8J9M0
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