Research workbench

AlphaFold monomer V2.0 prediction for proline--tRNA ligase (A0KPA5)

Analyse AlphaFold monomer V2.0 prediction for proline--tRNA ligase (A0KPA5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: A0KPA5
Type: protein
Length: 574 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xf87a97E0A4bB354D834857B14296240B167cbe70
Molecule: Proline--tRNA ligase
UniProt: A0KPA5
Pockets: 3 · best druggability 0.71

Structure

1 distinct chain · 30% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Proline--tRNA ligase	protein	574	30% helix, 30% strand	A0KPA5

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	457	0.71	0.82	48	empty
2	60	0.49	0.85	19	empty
3	80	0.42	0.79	20	empty

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0KPA5
Elsewhere: UniProt A0KPA5 · AlphaFold DB A0KPA5

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