Research workbench
AlphaFold monomer V2.0 prediction for asparagine--tRNA ligase, cytoplasmic (Q8BP47)
Analyse AlphaFold monomer V2.0 prediction for asparagine--tRNA ligase, cytoplasmic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8BP47
- Type
- protein
- Length
- 559 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- Asparagine--tRNA ligase, cytoplasmic
- UniProt
- Q8BP47
- Pockets
- 5 · best druggability 0.71
Structure
1 distinct chain · 37% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Asparagine--tRNA ligase, cytoplasmic | protein | 559 | 37% helix, 24% strand | Q8BP47 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 394 | 0.71 | 0.82 | 48 | empty |
| 2 | 198 | 0.48 | 0.75 | 24 | empty |
| 3 | 106 | 0.41 | 0.77 | 15 | empty |
| 4 | 87 | 0.34 | 0.74 | 16 | empty |
| 5 | 66 | 0.27 | 0.72 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8BP47
- Elsewhere: UniProt Q8BP47 · AlphaFold DB Q8BP47
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