Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (B1YAZ7)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (B1YAZ7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1YAZ7
- Type
- protein
- Length
- 565 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71588E5F8E9a83dA03D5148D4320336d807CA6D0
- Molecule
- Methionine--tRNA ligase
- UniProt
- B1YAZ7
- Pockets
- 6 · best druggability 0.67
Structure
1 distinct chain · 53% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 565 | 53% helix, 16% strand | B1YAZ7 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 363 | 0.67 | 0.80 | 39 | empty |
| 2 | 390 | 0.62 | 0.77 | 46 | empty |
| 3 | 106 | 0.54 | 0.83 | 15 | empty |
| 4 | 123 | 0.44 | 0.77 | 24 | empty |
| 5 | 65 | 0.30 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1YAZ7
- Elsewhere: UniProt B1YAZ7 · AlphaFold DB B1YAZ7
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