Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (A1SVA5)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (A1SVA5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1SVA5
- Type
- protein
- Length
- 686 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6F6BF0E3Cd9860be30A5b662928c9F8a906c20e4
- Molecule
- Methionine--tRNA ligase
- UniProt
- A1SVA5
- Pockets
- 4 · best druggability 0.67
Structure
1 distinct chain · 44% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 686 | 44% helix, 20% strand | A1SVA5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 567 | 0.67 | 0.77 | 62 | empty |
| 2 | 82 | 0.34 | 0.74 | 18 | empty |
| 3 | 65 | 0.28 | 0.73 | 15 | empty |
| 4 | 53 | 0.24 | 0.71 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1SVA5
- Elsewhere: UniProt A1SVA5 · AlphaFold DB A1SVA5
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