Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (Q8YAF2)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (Q8YAF2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8YAF2
- Type
- protein
- Length
- 664 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- Methionine--tRNA ligase
- UniProt
- Q8YAF2
- Pockets
- 4 · best druggability 0.76
Structure
1 distinct chain · 43% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 664 | 43% helix, 20% strand | Q8YAF2 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 752 | 0.76 | 0.80 | 62 | empty |
| 2 | 59 | 0.58 | 0.90 | 18 | empty |
| 3 | 102 | 0.38 | 0.75 | 21 | empty |
| 4 | 78 | 0.33 | 0.74 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8YAF2
- Elsewhere: UniProt Q8YAF2 · AlphaFold DB Q8YAF2
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