Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (B0B9D9)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (B0B9D9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0B9D9
- Type
- protein
- Length
- 550 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Methionine--tRNA ligase
- UniProt
- B0B9D9
- Pockets
- 3 · best druggability 0.70
Structure
1 distinct chain · 49% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 550 | 49% helix, 17% strand | B0B9D9 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 672 | 0.70 | 0.78 | 78 | empty |
| 2 | 52 | 0.34 | 0.78 | 14 | empty |
| 3 | 57 | 0.26 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0B9D9
- Elsewhere: UniProt B0B9D9 · AlphaFold DB B0B9D9
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