Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (B5RME0)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (B5RME0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5RME0
- Type
- protein
- Length
- 726 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1ED4a68B4011314730adE976b56Ad4cA21b54dcD
- Molecule
- Methionine--tRNA ligase
- UniProt
- B5RME0
- Pockets
- 7 · best druggability 0.64
Structure
1 distinct chain · 41% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 726 | 41% helix, 22% strand | B5RME0 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 290 | 0.64 | 0.81 | 38 | empty |
| 2 | 225 | 0.50 | 0.75 | 35 | empty |
| 3 | 150 | 0.45 | 0.75 | 26 | empty |
| 4 | 115 | 0.41 | 0.76 | 16 | empty |
| 5 | 78 | 0.35 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5RME0
- Elsewhere: UniProt B5RME0 · AlphaFold DB B5RME0
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