Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (Q0SMS1)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (Q0SMS1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0SMS1
- Type
- protein
- Length
- 724 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x360e90C457FFBa3C941Ed61D86e7Ab46eab18C5C
- Molecule
- Methionine--tRNA ligase
- UniProt
- Q0SMS1
- Pockets
- 7 · best druggability 0.66
Structure
1 distinct chain · 41% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 724 | 41% helix, 22% strand | Q0SMS1 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 537 | 0.66 | 0.77 | 60 | empty |
| 2 | 208 | 0.49 | 0.76 | 25 | empty |
| 3 | 114 | 0.41 | 0.75 | 20 | empty |
| 4 | 88 | 0.38 | 0.76 | 24 | empty |
| 5 | 82 | 0.36 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0SMS1
- Elsewhere: UniProt Q0SMS1 · AlphaFold DB Q0SMS1
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