Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (C5C046)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (C5C046) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5C046
- Type
- protein
- Length
- 614 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Methionine--tRNA ligase
- UniProt
- C5C046
- Pockets
- 6 · best druggability 0.68
Structure
1 distinct chain · 46% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 614 | 46% helix, 18% strand | C5C046 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 558 | 0.68 | 0.78 | 63 | empty |
| 2 | 347 | 0.62 | 0.78 | 37 | empty |
| 3 | 174 | 0.55 | 0.80 | 25 | empty |
| 4 | 68 | 0.40 | 0.80 | 15 | empty |
| 5 | 119 | 0.40 | 0.75 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5C046
- Elsewhere: UniProt C5C046 · AlphaFold DB C5C046
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