Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (Q5P239)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (Q5P239) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5P239
- Type
- protein
- Length
- 718 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6dF8740DB66EA0E28dc7A9ed64F13eCBcdEEd7D9
- Molecule
- Methionine--tRNA ligase
- UniProt
- Q5P239
- Pockets
- 5 · best druggability 0.70
Structure
1 distinct chain · 40% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 718 | 40% helix, 20% strand | Q5P239 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 616 | 0.70 | 0.78 | 67 | empty |
| 2 | 128 | 0.42 | 0.76 | 29 | empty |
| 3 | 80 | 0.34 | 0.75 | 15 | empty |
| 4 | 56 | 0.27 | 0.73 | 17 | empty |
| 5 | 63 | 0.27 | 0.73 | 9 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5P239
- Elsewhere: UniProt Q5P239 · AlphaFold DB Q5P239
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