Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (O67298)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (O67298) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O67298
- Type
- protein
- Length
- 497 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9E2F05BF69E7aC48aE7A36B273D1CAb5cD94da55
- Molecule
- Methionine--tRNA ligase
- UniProt
- O67298
- Pockets
- 2 · best druggability 0.78
Structure
1 distinct chain · 52% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 497 | 52% helix, 17% strand | O67298 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 946 | 0.78 | 0.80 | 81 | empty |
| 2 | 52 | 0.30 | 0.76 | 11 | empty |
Compared structures
- 2CT8 · Crystal structure of aquifex aeolicus methionyl-tRNA synthetase complexed with TRNA(MET)… · an experimental structure of the same protein · chain A against A, TM-score 0.93
- 2CT8 · Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met)… · an experimental structure of the same protein · chain A against A, TM-score 0.93
- 2CSX · Crystal structure of Aquifex aeolicus methionyl-tRNA synthetase complexed with tRNA(Met) · an experimental structure of the same protein · chain A against A, TM-score 0.92
- 2CSX · Crystal structure of aquifex aeolicus methionyl-tRNA synthetase complexed with TRNA(MET) · an experimental structure of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O67298
- Elsewhere: UniProt O67298 · AlphaFold DB O67298
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