Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (Q9YCY3)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase (Q9YCY3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9YCY3
- Type
- protein
- Length
- 572 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xAF1f6377a0B1Dd116Ba7B2243519F067d46ef767
- Molecule
- Methionine--tRNA ligase
- UniProt
- Q9YCY3
- Pockets
- 5 · best druggability 0.75
Structure
1 distinct chain · 51% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase | protein | 572 | 51% helix, 15% strand | Q9YCY3 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 924 | 0.75 | 0.78 | 82 | empty |
| 2 | 106 | 0.49 | 0.81 | 19 | empty |
| 3 | 78 | 0.40 | 0.78 | 17 | empty |
| 4 | 51 | 0.33 | 0.78 | 11 | empty |
| 5 | 54 | 0.28 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9YCY3
- Elsewhere: UniProt Q9YCY3 · AlphaFold DB Q9YCY3
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