Research workbench
AlphaFold monomer V2.0 prediction for methionine--tRNA ligase, mitochondrial (Q9VFL5)
Analyse AlphaFold monomer V2.0 prediction for methionine--tRNA ligase, mitochondrial… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VFL5
- Type
- protein
- Length
- 582 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x756bFDb0226Aa720bF009aFD5c0C76F6dFE0Cc9D
- Molecule
- Methionine--tRNA ligase, mitochondrial
- UniProt
- Q9VFL5
- Pockets
- 5 · best druggability 0.73
Structure
1 distinct chain · 47% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine--tRNA ligase, mitochondrial | protein | 582 | 47% helix, 15% strand | Q9VFL5 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 608 | 0.73 | 0.80 | 45 | empty |
| 2 | 52 | 0.58 | 0.91 | 21 | empty |
| 3 | 183 | 0.53 | 0.78 | 32 | empty |
| 4 | 229 | 0.46 | 0.73 | 25 | empty |
| 5 | 57 | 0.29 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VFL5
- Elsewhere: UniProt Q9VFL5 · AlphaFold DB Q9VFL5
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