Research workbench
AlphaFold monomer V2.0 prediction for probable methionine--tRNA ligase, cytoplasmic (Q8SQW5)
Analyse AlphaFold monomer V2.0 prediction for probable methionine--tRNA ligase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8SQW5
- Type
- protein
- Length
- 550 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9E2F05BF69E7aC48aE7A36B273D1CAb5cD94da55
- Molecule
- Probable methionine--tRNA ligase, cytoplasmic
- UniProt
- Q8SQW5
- Pockets
- 4 · best druggability 0.70
Structure
1 distinct chain · 50% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable methionine--tRNA ligase, cytoplasmic | protein | 550 | 50% helix, 17% strand | Q8SQW5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 618 | 0.70 | 0.78 | 76 | empty |
| 2 | 63 | 0.48 | 0.84 | 14 | empty |
| 3 | 54 | 0.39 | 0.81 | 15 | empty |
| 4 | 51 | 0.25 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8SQW5
- Elsewhere: UniProt Q8SQW5 · AlphaFold DB Q8SQW5
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