Research workbench
AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q8ZDF8)
Analyse AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q8ZDF8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8ZDF8
- Type
- protein
- Length
- 860 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xda438C258462540cc4Da2A9a1238619F7B216c64
- Molecule
- Leucine--tRNA ligase
- UniProt
- Q8ZDF8
- Pockets
- 5 · best druggability 0.78
Structure
1 distinct chain · 39% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Leucine--tRNA ligase | protein | 860 | 39% helix, 22% strand | Q8ZDF8 |
Pockets
5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 764 | 0.78 | 0.82 | 65 | empty |
| 2 | 710 | 0.74 | 0.80 | 71 | empty |
| 3 | 114 | 0.58 | 0.85 | 19 | empty |
| 4 | 177 | 0.57 | 0.81 | 28 | empty |
| 5 | 100 | 0.39 | 0.76 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZDF8
- Elsewhere: UniProt Q8ZDF8 · AlphaFold DB Q8ZDF8
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