Research workbench
AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q9PBG8)
Analyse AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q9PBG8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9PBG8
- Type
- protein
- Length
- 879 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- Leucine--tRNA ligase
- UniProt
- Q9PBG8
- Pockets
- 7 · best druggability 0.82
Structure
1 distinct chain · 39% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Leucine--tRNA ligase | protein | 879 | 39% helix, 22% strand | Q9PBG8 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 960 | 0.82 | 0.84 | 103 | empty |
| 2 | 363 | 0.67 | 0.80 | 36 | empty |
| 3 | 70 | 0.48 | 0.84 | 18 | empty |
| 4 | 127 | 0.41 | 0.75 | 25 | empty |
| 5 | 74 | 0.36 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9PBG8
- Elsewhere: UniProt Q9PBG8 · AlphaFold DB Q9PBG8
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