Research workbench
AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q8DFE2)
Analyse AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q8DFE2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8DFE2
- Type
- protein
- Length
- 857 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB05a6C07895e32B47A59E248baa07d66d77b0e17
- Molecule
- Leucine--tRNA ligase
- UniProt
- Q8DFE2
- Pockets
- 7 · best druggability 0.80
Structure
1 distinct chain · 39% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Leucine--tRNA ligase | protein | 857 | 39% helix, 23% strand | Q8DFE2 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1014 | 0.80 | 0.81 | 83 | empty |
| 2 | 608 | 0.74 | 0.81 | 51 | empty |
| 3 | 104 | 0.48 | 0.81 | 26 | empty |
| 4 | 113 | 0.44 | 0.77 | 16 | empty |
| 5 | 66 | 0.41 | 0.81 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DFE2
- Elsewhere: UniProt Q8DFE2 · AlphaFold DB Q8DFE2
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