Research workbench
AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q3M3A3)
Analyse AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q3M3A3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3M3A3
- Type
- protein
- Length
- 872 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA777E42419704A95462d8413746e87F7381Bd58e
- Molecule
- Leucine--tRNA ligase
- UniProt
- Q3M3A3
- Pockets
- 9 · best druggability 0.80
Structure
1 distinct chain · 40% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Leucine--tRNA ligase | protein | 872 | 40% helix, 21% strand | Q3M3A3 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1048 | 0.80 | 0.81 | 95 | empty |
| 2 | 229 | 0.61 | 0.81 | 25 | empty |
| 3 | 85 | 0.55 | 0.86 | 24 | empty |
| 4 | 162 | 0.45 | 0.75 | 36 | empty |
| 5 | 100 | 0.43 | 0.79 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3M3A3
- Elsewhere: UniProt Q3M3A3 · AlphaFold DB Q3M3A3
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