Research workbench
AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q5N006)
Analyse AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q5N006) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5N006
- Type
- protein
- Length
- 865 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xcF3444A9d2FD68005aA0248bc2E47C278EDb79C8
- Molecule
- Leucine--tRNA ligase
- UniProt
- Q5N006
- Pockets
- 7 · best druggability 0.73
Structure
1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Leucine--tRNA ligase | protein | 865 | 39% helix, 21% strand | Q5N006 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 682 | 0.73 | 0.79 | 69 | empty |
| 2 | 644 | 0.71 | 0.79 | 65 | empty |
| 3 | 177 | 0.54 | 0.79 | 35 | empty |
| 4 | 50 | 0.46 | 0.86 | 21 | empty |
| 5 | 70 | 0.35 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5N006
- Elsewhere: UniProt Q5N006 · AlphaFold DB Q5N006
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