Research workbench
AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (P0DG45)
Analyse AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (P0DG45) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0DG45
- Type
- protein
- Length
- 833 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- Leucine--tRNA ligase
- UniProt
- P0DG45
- Pockets
- 5 · best druggability 0.80
Structure
1 distinct chain · 39% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Leucine--tRNA ligase | protein | 833 | 39% helix, 22% strand | P0DG45 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 959 | 0.80 | 0.82 | 97 | empty |
| 2 | 201 | 0.58 | 0.80 | 28 | empty |
| 3 | 82 | 0.45 | 0.81 | 16 | empty |
| 4 | 67 | 0.31 | 0.75 | 16 | empty |
| 5 | 63 | 0.28 | 0.73 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DG45
- Elsewhere: UniProt P0DG45 · AlphaFold DB P0DG45
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