Research workbench
AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q5YN65)
Analyse AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (Q5YN65) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5YN65
- Type
- protein
- Length
- 950 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xfD95B4E15340044AC2c452991b605A6D92710AD6
- Molecule
- Leucine--tRNA ligase
- UniProt
- Q5YN65
- Pockets
- 7 · best druggability 0.72
Structure
1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Leucine--tRNA ligase | protein | 950 | 39% helix, 21% strand | Q5YN65 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 565 | 0.72 | 0.80 | 52 | empty |
| 2 | 643 | 0.67 | 0.76 | 53 | empty |
| 3 | 82 | 0.63 | 0.90 | 25 | empty |
| 4 | 196 | 0.60 | 0.82 | 23 | empty |
| 5 | 134 | 0.40 | 0.74 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5YN65
- Elsewhere: UniProt Q5YN65 · AlphaFold DB Q5YN65
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