Research workbench
AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (A5UDF4)
Analyse AlphaFold monomer V2.0 prediction for leucine--tRNA ligase (A5UDF4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5UDF4
- Type
- protein
- Length
- 861 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Leucine--tRNA ligase
- UniProt
- A5UDF4
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 39% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Leucine--tRNA ligase | protein | 861 | 39% helix, 23% strand | A5UDF4 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 953 | 0.76 | 0.79 | 80 | empty |
| 2 | 746 | 0.75 | 0.80 | 64 | empty |
| 3 | 97 | 0.51 | 0.83 | 16 | empty |
| 4 | 93 | 0.36 | 0.74 | 16 | empty |
| 5 | 68 | 0.31 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5UDF4
- Elsewhere: UniProt A5UDF4 · AlphaFold DB A5UDF4
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