Research workbench
AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (B5BFK5)
Analyse AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (B5BFK5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5BFK5
- Type
- protein
- Length
- 505 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Lysine--tRNA ligase
- UniProt
- B5BFK5
- Pockets
- 6 · best druggability 0.75
Structure
1 distinct chain · 39% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine--tRNA ligase | protein | 505 | 39% helix, 25% strand | B5BFK5 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 649 | 0.75 | 0.81 | 65 | empty |
| 2 | 127 | 0.43 | 0.76 | 21 | empty |
| 3 | 79 | 0.38 | 0.77 | 18 | empty |
| 4 | 51 | 0.33 | 0.78 | 12 | empty |
| 5 | 77 | 0.30 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5BFK5
- Elsewhere: UniProt B5BFK5 · AlphaFold DB B5BFK5
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