Research workbench
AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (Q5PL30)
Analyse AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (Q5PL30) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5PL30
- Type
- protein
- Length
- 505 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- Lysine--tRNA ligase
- UniProt
- Q5PL30
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 39% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine--tRNA ligase | protein | 505 | 39% helix, 25% strand | Q5PL30 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 680 | 0.76 | 0.81 | 77 | empty |
| 2 | 125 | 0.42 | 0.76 | 20 | empty |
| 3 | 59 | 0.33 | 0.77 | 18 | empty |
| 4 | 81 | 0.31 | 0.73 | 14 | empty |
| 5 | 58 | 0.27 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5PL30
- Elsewhere: UniProt Q5PL30 · AlphaFold DB Q5PL30
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