Research workbench
AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (B4F0M6)
Analyse AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (B4F0M6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4F0M6
- Type
- protein
- Length
- 504 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- Lysine--tRNA ligase
- UniProt
- B4F0M6
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 38% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine--tRNA ligase | protein | 504 | 38% helix, 25% strand | B4F0M6 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 579 | 0.76 | 0.83 | 64 | empty |
| 2 | 127 | 0.41 | 0.75 | 21 | empty |
| 3 | 64 | 0.35 | 0.77 | 15 | empty |
| 4 | 86 | 0.32 | 0.73 | 14 | empty |
| 5 | 71 | 0.27 | 0.72 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4F0M6
- Elsewhere: UniProt B4F0M6 · AlphaFold DB B4F0M6
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