Research workbench
AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (A5EY50)
Analyse AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (A5EY50) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5EY50
- Type
- protein
- Length
- 498 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xFa872453622BC4f6676d177663b60596b0BD4b6d
- Molecule
- Lysine--tRNA ligase
- UniProt
- A5EY50
- Pockets
- 3 · best druggability 0.72
Structure
1 distinct chain · 38% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine--tRNA ligase | protein | 498 | 38% helix, 25% strand | A5EY50 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 536 | 0.72 | 0.81 | 62 | empty |
| 2 | 181 | 0.45 | 0.74 | 22 | empty |
| 3 | 75 | 0.34 | 0.75 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5EY50
- Elsewhere: UniProt A5EY50 · AlphaFold DB A5EY50
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