Research workbench
AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (A0PXN4)
Analyse AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (A0PXN4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0PXN4
- Type
- protein
- Length
- 510 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Lysine--tRNA ligase
- UniProt
- A0PXN4
- Pockets
- 5 · best druggability 0.79
Structure
1 distinct chain · 38% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine--tRNA ligase | protein | 510 | 38% helix, 25% strand | A0PXN4 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 679 | 0.79 | 0.84 | 69 | empty |
| 2 | 80 | 0.39 | 0.78 | 15 | empty |
| 3 | 126 | 0.39 | 0.74 | 19 | empty |
| 4 | 98 | 0.34 | 0.73 | 20 | empty |
| 5 | 77 | 0.32 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0PXN4
- Elsewhere: UniProt A0PXN4 · AlphaFold DB A0PXN4
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