Research workbench
AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (Q2IPX5)
Analyse AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (Q2IPX5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2IPX5
- Type
- protein
- Length
- 513 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBe5052869ae2CCfE8B362617F53C763F9782C97e
- Molecule
- Lysine--tRNA ligase
- UniProt
- Q2IPX5
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 38% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine--tRNA ligase | protein | 513 | 38% helix, 24% strand | Q2IPX5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 797 | 0.74 | 0.79 | 69 | empty |
| 2 | 61 | 0.38 | 0.79 | 15 | empty |
| 3 | 132 | 0.38 | 0.73 | 24 | empty |
| 4 | 67 | 0.31 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2IPX5
- Elsewhere: UniProt Q2IPX5 · AlphaFold DB Q2IPX5
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