Research workbench
AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (A8ESJ5)
Analyse AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (A8ESJ5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8ESJ5
- Type
- protein
- Length
- 504 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xDd175FDc2561f3a80D6d56bCDE090F8cA47DD5f0
- Molecule
- Lysine--tRNA ligase
- UniProt
- A8ESJ5
- Pockets
- 5 · best druggability 0.75
Structure
1 distinct chain · 35% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine--tRNA ligase | protein | 504 | 35% helix, 25% strand | A8ESJ5 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 661 | 0.75 | 0.81 | 66 | empty |
| 2 | 202 | 0.47 | 0.74 | 33 | empty |
| 3 | 173 | 0.44 | 0.74 | 24 | empty |
| 4 | 50 | 0.28 | 0.75 | 17 | empty |
| 5 | 54 | 0.27 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8ESJ5
- Elsewhere: UniProt A8ESJ5 · AlphaFold DB A8ESJ5
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