Research workbench
AlphaFold monomer V2.0 prediction for isoleucine--tRNA ligase (B8DPD6)
Analyse AlphaFold monomer V2.0 prediction for isoleucine--tRNA ligase (B8DPD6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8DPD6
- Type
- protein
- Length
- 938 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1D85cf76AA8a024dd37f8dd64B4eD5691Eb91E72
- Molecule
- Isoleucine--tRNA ligase
- UniProt
- B8DPD6
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 46% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Isoleucine--tRNA ligase | protein | 938 | 46% helix, 19% strand | B8DPD6 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 656 | 0.74 | 0.80 | 61 | empty |
| 2 | 669 | 0.73 | 0.79 | 49 | empty |
| 3 | 288 | 0.61 | 0.79 | 37 | empty |
| 4 | 139 | 0.49 | 0.79 | 22 | empty |
| 5 | 118 | 0.36 | 0.73 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8DPD6
- Elsewhere: UniProt B8DPD6 · AlphaFold DB B8DPD6
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