Research workbench
AlphaFold monomer V2.0 prediction for histidine--tRNA ligase (Q8Y708)
Analyse AlphaFold monomer V2.0 prediction for histidine--tRNA ligase (Q8Y708) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8Y708
- Type
- protein
- Length
- 425 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3B2F9027B14C9967255cC13a4b5F26d2c2Add9A0
- Molecule
- Histidine--tRNA ligase
- UniProt
- Q8Y708
- Pockets
- 3 · best druggability 0.76
Structure
1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histidine--tRNA ligase | protein | 425 | 42% helix, 22% strand | Q8Y708 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 685 | 0.76 | 0.82 | 57 | empty |
| 2 | 286 | 0.57 | 0.77 | 32 | empty |
| 3 | 55 | 0.30 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Y708
- Elsewhere: UniProt Q8Y708 · AlphaFold DB Q8Y708
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