Research workbench
AlphaFold monomer V2.0 prediction for histidine--tRNA ligase (A7ZDK1)
Analyse AlphaFold monomer V2.0 prediction for histidine--tRNA ligase (A7ZDK1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A7ZDK1
- Type
- protein
- Length
- 408 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Histidine--tRNA ligase
- UniProt
- A7ZDK1
- Pockets
- 3 · best druggability 0.75
Structure
1 distinct chain · 43% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histidine--tRNA ligase | protein | 408 | 43% helix, 23% strand | A7ZDK1 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 533 | 0.75 | 0.83 | 49 | empty |
| 2 | 158 | 0.54 | 0.80 | 25 | empty |
| 3 | 57 | 0.39 | 0.81 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7ZDK1
- Elsewhere: UniProt A7ZDK1 · AlphaFold DB A7ZDK1
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