Research workbench
AlphaFold monomer V2.0 prediction for histidine--tRNA ligase, cytoplasmic (F4IYF8)
Analyse AlphaFold monomer V2.0 prediction for histidine--tRNA ligase, cytoplasmic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- F4IYF8
- Type
- protein
- Length
- 883 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Histidine--tRNA ligase, cytoplasmic
- UniProt
- F4IYF8
- Pockets
- 11 · best druggability 0.75
Structure
1 distinct chain · 52% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Histidine--tRNA ligase, cytoplasmic | protein | 883 | 52% helix, 12% strand | F4IYF8 |
Pockets
11 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 652 | 0.75 | 0.82 | 65 | empty |
| 2 | 395 | 0.61 | 0.77 | 46 | empty |
| 3 | 156 | 0.48 | 0.77 | 21 | empty |
| 4 | 84 | 0.37 | 0.76 | 14 | empty |
| 5 | 77 | 0.37 | 0.77 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F4IYF8
- Elsewhere: UniProt F4IYF8 · AlphaFold DB F4IYF8
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