Research workbench
AlphaFold monomer V2.0 prediction for glycine--tRNA ligase (Q72YG8)
Analyse AlphaFold monomer V2.0 prediction for glycine--tRNA ligase (Q72YG8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q72YG8
- Type
- protein
- Length
- 458 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Glycine--tRNA ligase
- UniProt
- Q72YG8
- Pockets
- 5 · best druggability 0.76
Structure
1 distinct chain · 37% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycine--tRNA ligase | protein | 458 | 37% helix, 27% strand | Q72YG8 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1191 | 0.76 | 0.78 | 78 | empty |
| 2 | 92 | 0.37 | 0.75 | 13 | empty |
| 3 | 60 | 0.28 | 0.74 | 13 | empty |
| 4 | 52 | 0.25 | 0.73 | 13 | empty |
| 5 | 50 | 0.25 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q72YG8
- Elsewhere: UniProt Q72YG8 · AlphaFold DB Q72YG8
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