Research workbench
AlphaFold monomer V2.0 prediction for glycine--tRNA ligase, mitochondrial 1 (O23627)
Analyse AlphaFold monomer V2.0 prediction for glycine--tRNA ligase, mitochondrial 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O23627
- Type
- protein
- Length
- 729 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x02C1142a7b19Fa3FFB07DbCbC357c38F332D0630
- Molecule
- Glycine--tRNA ligase, mitochondrial 1
- UniProt
- O23627
- Pockets
- 4 · best druggability 0.80
Structure
1 distinct chain · 42% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycine--tRNA ligase, mitochondrial 1 | protein | 729 | 42% helix, 25% strand | O23627 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1149 | 0.80 | 0.81 | 101 | empty |
| 2 | 203 | 0.46 | 0.74 | 30 | empty |
| 3 | 131 | 0.40 | 0.74 | 24 | empty |
| 4 | 100 | 0.34 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O23627
- Elsewhere: UniProt O23627 · AlphaFold DB O23627
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