Research workbench
AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (Q55690)
Analyse AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (Q55690) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q55690
- Type
- protein
- Length
- 722 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0fa4198465b0fC29C1EbbF4D4ED975CabB4c1d38
- Molecule
- Glycine--tRNA ligase beta subunit
- UniProt
- Q55690
- Pockets
- 5 · best druggability 0.55
Structure
1 distinct chain · 55% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycine--tRNA ligase beta subunit | protein | 722 | 55% helix, 16% strand | Q55690 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 273 | 0.55 | 0.76 | 28 | empty |
| 2 | 120 | 0.50 | 0.80 | 17 | empty |
| 3 | 67 | 0.49 | 0.84 | 16 | empty |
| 4 | 113 | 0.38 | 0.74 | 20 | empty |
| 5 | 59 | 0.31 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q55690
- Elsewhere: UniProt Q55690 · AlphaFold DB Q55690
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