Research workbench
AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (B8ZL20)
Analyse AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (B8ZL20) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8ZL20
- Type
- protein
- Length
- 678 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- Glycine--tRNA ligase beta subunit
- UniProt
- B8ZL20
- Pockets
- 3 · best druggability 0.54
Structure
1 distinct chain · 51% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycine--tRNA ligase beta subunit | protein | 678 | 51% helix, 17% strand | B8ZL20 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 235 | 0.54 | 0.77 | 20 | empty |
| 2 | 116 | 0.41 | 0.76 | 20 | empty |
| 3 | 65 | 0.30 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8ZL20
- Elsewhere: UniProt B8ZL20 · AlphaFold DB B8ZL20
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