Research workbench
AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (Q8Z2B3)
Analyse AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (Q8Z2B3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8Z2B3
- Type
- protein
- Length
- 689 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2A3fB0b56B9d09445eFeB7C267536EF817dd7D
- Molecule
- Glycine--tRNA ligase beta subunit
- UniProt
- Q8Z2B3
- Pockets
- 4 · best druggability 0.54
Structure
1 distinct chain · 53% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycine--tRNA ligase beta subunit | protein | 689 | 53% helix, 16% strand | Q8Z2B3 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 256 | 0.54 | 0.76 | 21 | empty |
| 2 | 119 | 0.41 | 0.76 | 23 | empty |
| 3 | 92 | 0.40 | 0.77 | 18 | empty |
| 4 | 95 | 0.34 | 0.73 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Z2B3
- Elsewhere: UniProt Q8Z2B3 · AlphaFold DB Q8Z2B3
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