Research workbench
AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (Q68VR4)
Analyse AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (Q68VR4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q68VR4
- Type
- protein
- Length
- 664 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x82eDD4a18Ff145e81685990353EbDBB7Bb27EF2c
- Molecule
- Glycine--tRNA ligase beta subunit
- UniProt
- Q68VR4
- Pockets
- 5 · best druggability 0.53
Structure
1 distinct chain · 55% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycine--tRNA ligase beta subunit | protein | 664 | 55% helix, 16% strand | Q68VR4 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 234 | 0.53 | 0.76 | 20 | empty |
| 2 | 120 | 0.45 | 0.77 | 25 | empty |
| 3 | 61 | 0.43 | 0.82 | 12 | empty |
| 4 | 103 | 0.37 | 0.75 | 17 | empty |
| 5 | 55 | 0.33 | 0.77 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q68VR4
- Elsewhere: UniProt Q68VR4 · AlphaFold DB Q68VR4
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