Research workbench
AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (B8FKD8)
Analyse AlphaFold monomer V2.0 prediction for glycine--tRNA ligase beta subunit (B8FKD8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8FKD8
- Type
- protein
- Length
- 690 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Glycine--tRNA ligase beta subunit
- UniProt
- B8FKD8
- Pockets
- 3 · best druggability 0.49
Structure
1 distinct chain · 54% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glycine--tRNA ligase beta subunit | protein | 690 | 54% helix, 15% strand | B8FKD8 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 161 | 0.49 | 0.77 | 19 | empty |
| 2 | 156 | 0.44 | 0.75 | 22 | empty |
| 3 | 74 | 0.30 | 0.73 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8FKD8
- Elsewhere: UniProt B8FKD8 · AlphaFold DB B8FKD8
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