Research workbench
AlphaFold monomer V2.0 prediction for phenylalanine--tRNA ligase beta subunit (C3NMS5)
Analyse AlphaFold monomer V2.0 prediction for phenylalanine--tRNA ligase beta subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C3NMS5
- Type
- protein
- Length
- 545 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdA3fF3FD3B0b49D6e16b523B460BAF6aDd142C24
- Molecule
- Phenylalanine--tRNA ligase beta subunit
- UniProt
- C3NMS5
- Pockets
- 4 · best druggability 0.61
Structure
1 distinct chain · 32% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phenylalanine--tRNA ligase beta subunit | protein | 545 | 32% helix, 31% strand | C3NMS5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 149 | 0.61 | 0.85 | 28 | empty |
| 2 | 153 | 0.45 | 0.76 | 22 | empty |
| 3 | 58 | 0.38 | 0.79 | 13 | empty |
| 4 | 59 | 0.34 | 0.77 | 15 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C3NMS5
- Elsewhere: UniProt C3NMS5 · AlphaFold DB C3NMS5
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