Research workbench
AlphaFold monomer V2.0 prediction for pre-mRNA-splicing factor SYF1 (P0CO08)
Analyse AlphaFold monomer V2.0 prediction for pre-mRNA-splicing factor SYF1 (P0CO08) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0CO08
- Type
- protein
- Length
- 1,031 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- Pre-mRNA-splicing factor SYF1
- UniProt
- P0CO08
- Pockets
- 7 · best druggability 0.66
Structure
1 distinct chain · 65% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-mRNA-splicing factor SYF1 | protein | 1031 | 65% helix, 1% strand | P0CO08 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 273 | 0.66 | 0.82 | 24 | empty |
| 2 | 560 | 0.63 | 0.75 | 48 | empty |
| 3 | 239 | 0.50 | 0.75 | 28 | empty |
| 4 | 97 | 0.39 | 0.76 | 19 | empty |
| 5 | 55 | 0.37 | 0.80 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CO08
- Elsewhere: UniProt P0CO08 · AlphaFold DB P0CO08
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