Research workbench
AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (B0SKQ2)
Analyse AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (B0SKQ2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0SKQ2
- Type
- protein
- Length
- 517 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x530483e256322e793FD6db9fDe7C0068338f61A8
- Molecule
- Glutamate--tRNA ligase
- UniProt
- B0SKQ2
- Pockets
- 6 · best druggability 0.65
Structure
1 distinct chain · 49% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutamate--tRNA ligase | protein | 517 | 49% helix, 12% strand | B0SKQ2 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 412 | 0.65 | 0.79 | 38 | empty |
| 2 | 131 | 0.58 | 0.83 | 17 | empty |
| 3 | 81 | 0.40 | 0.78 | 17 | empty |
| 4 | 60 | 0.33 | 0.76 | 17 | empty |
| 5 | 53 | 0.28 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0SKQ2
- Elsewhere: UniProt B0SKQ2 · AlphaFold DB B0SKQ2
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