Research workbench
AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (A1BDK8)
Analyse AlphaFold monomer V2.0 prediction for glutamate--tRNA ligase (A1BDK8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1BDK8
- Type
- protein
- Length
- 502 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c9140a3Ab4F8AA2F14f418833981d248115b94
- Molecule
- Glutamate--tRNA ligase
- UniProt
- A1BDK8
- Pockets
- 3 · best druggability 0.69
Structure
1 distinct chain · 50% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutamate--tRNA ligase | protein | 502 | 50% helix, 12% strand | A1BDK8 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 483 | 0.69 | 0.80 | 46 | empty |
| 2 | 66 | 0.34 | 0.76 | 12 | empty |
| 3 | 51 | 0.30 | 0.76 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1BDK8
- Elsewhere: UniProt A1BDK8 · AlphaFold DB A1BDK8
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